Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | CALAB_RS14625 | Not Available | Positive | 3702565 - 3703047 | 18535.5 |
| deoxynucleoside kinase | CALAB_RS14630 | Not Available | Positive | 3703049 - 3703696 | 25726.8 |
| hypothetical protein | CALAB_RS14635 | Not Available | Positive | 3703700 - 3703885 | 7383.82 |
| hd-gyp domain-containing protein | CALAB_RS14640 | Not Available | Positive | 3703854 - 3705161 | 50381.9 |
| phosphatase pap2 family protein | CALAB_RS14645 | Not Available | Negative | 3705124 - 3706107 | 38517.6 |
| dna polymerase iv | CALAB_RS14650 | Not Available | Positive | 3706710 - 3707888 | 44332.7 |
| n-acetylmuramoyl-l-alanine amidase | CALAB_RS14655 | Not Available | Positive | 3708069 - 3708680 | 22347.8 |
| hypothetical protein | CALAB_RS14660 | Not Available | Positive | 3708703 - 3709083 | 14297.8 |
| hypothetical protein | CALAB_RS14665 | Not Available | Positive | 3709083 - 3709637 | 21068.8 |
| hypothetical protein | CALAB_RS14670 | Not Available | Positive | 3709643 - 3710092 | 16800.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
