Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-binding-like beta-propeller repeat protein | CALAB_RS14570 | Not Available | Negative | 3688836 - 3689969 | 42253.0 |
| pd40 domain-containing protein | CALAB_RS14575 | Not Available | Negative | 3689969 - 3692794 | 110085.0 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | CALAB_RS14580 | Not Available | Positive | 3693375 - 3695207 | 67388.4 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | CALAB_RS14585 | Not Available | Positive | 3695227 - 3696264 | 38596.0 |
| hd domain-containing phosphohydrolase | CALAB_RS14590 | Not Available | Positive | 3696353 - 3697339 | 36860.0 |
| cation transporter | CALAB_RS14595 | Not Available | Negative | 3697350 - 3697853 | 17700.6 |
| cation transporter | CALAB_RS21545 | Not Available | Negative | 3697876 - 3698211 | 11967.5 |
| aspartate-semialdehyde dehydrogenase | CALAB_RS14605 | Not Available | Negative | 3698353 - 3699417 | 38527.8 |
| s46 family peptidase | CALAB_RS14615 | Not Available | Positive | 3699847 - 3701988 | 82508.5 |
| dihydroneopterin aldolase | CALAB_RS14620 | Not Available | Positive | 3702211 - 3702561 | 13839.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
