Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS14375 | Not Available | Negative | 3624822 - 3627476 | 102271.0 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | CALAB_RS14380 | Not Available | Positive | 3627689 - 3628636 | 35337.9 |
| aspartate 1-decarboxylase | CALAB_RS14385 | Not Available | Positive | 3628902 - 3629273 | 13579.2 |
| chloride channel protein | CALAB_RS14390 | Not Available | Positive | 3629283 - 3631367 | 76633.8 |
| acyl-coa dehydrogenase | CALAB_RS14395 | Not Available | Positive | 3631392 - 3632543 | 42514.1 |
| hd family phosphohydrolase | CALAB_RS14400 | Not Available | Positive | 3632551 - 3634839 | 87586.2 |
| rrna maturation rnase ybey | CALAB_RS14405 | Not Available | Positive | 3634820 - 3635248 | 16572.5 |
| hemolysin family protein | CALAB_RS14410 | Not Available | Positive | 3635370 - 3636665 | 49015.3 |
| l-seryl-trna(sec) selenium transferase | CALAB_RS14415 | Not Available | Positive | 3636679 - 3638085 | 52409.7 |
| sodium:solute symporter family protein | CALAB_RS14420 | Not Available | Negative | 3638218 - 3639864 | 60224.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
