Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rlua family pseudouridine synthase | CALAB_RS14165 | Not Available | Negative | 3580469 - 3581437 | 37413.2 |
| signal peptidase ii | CALAB_RS14170 | Not Available | Negative | 3581445 - 3582029 | 21761.9 |
| trar/dksa family transcriptional regulator | CALAB_RS14175 | Not Available | Negative | 3582038 - 3582409 | 14285.1 |
| isoleucine--trna ligase | CALAB_RS14180 | Not Available | Negative | 3582423 - 3585689 | 126740.0 |
| purine-nucleoside phosphorylase | CALAB_RS14185 | Not Available | Negative | 3585729 - 3586559 | 30683.7 |
| hypothetical protein | CALAB_RS14190 | Not Available | Negative | 3586552 - 3587208 | 24598.0 |
| diviva domain-containing protein | CALAB_RS14195 | Not Available | Negative | 3587246 - 3587956 | 27403.7 |
| yggs family pyridoxal phosphate-dependent enzyme | CALAB_RS14200 | Not Available | Negative | 3587953 - 3588651 | 26011.5 |
| duf3467 domain-containing protein | CALAB_RS14205 | Not Available | Negative | 3588734 - 3589042 | 11612.0 |
| dna primase | CALAB_RS14210 | Not Available | Positive | 3589143 - 3590966 | 70016.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
