Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | CALAB_RS20245 | Not Available | Negative | 3571000 - 3571449 | 17777.5 |
| phage integrase n-terminal sam-like domain-containing protein | CALAB_RS14120 | Not Available | Negative | 3572350 - 3572556 | 8073.49 |
| helix-turn-helix domain-containing protein | CALAB_RS14125 | Not Available | Positive | 3572678 - 3573565 | 33930.9 |
| cupin domain-containing protein | CALAB_RS14130 | Not Available | Positive | 3573682 - 3574230 | 19974.4 |
| hypothetical protein | CALAB_RS14135 | Not Available | Positive | 3574255 - 3574752 | 18796.1 |
| is110 family transposase | CALAB_RS14140 | Not Available | Positive | 3575118 - 3576359 | 47440.1 |
| zinc-ribbon domain-containing protein | CALAB_RS22010 | Not Available | Positive | 3577016 - 3577195 | 6842.3 |
| addiction module protein | CALAB_RS14150 | Not Available | Positive | 3577742 - 3577951 | 8402.32 |
| type ii toxin-antitoxin system rele/pare family toxin | CALAB_RS14155 | Not Available | Positive | 3577952 - 3578245 | 11574.1 |
| hypothetical protein | CALAB_RS14160 | Not Available | Positive | 3578377 - 3580341 | 76297.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
