Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | CALAB_RS14055 | Not Available | Positive | 3559635 - 3560516 | 33587.7 |
| 30s ribosomal protein s21 | CALAB_RS14060 | Not Available | Positive | 3560553 - 3560750 | 7866.78 |
| gatb/yqey domain-containing protein | CALAB_RS14065 | Not Available | Positive | 3560757 - 3561212 | 17505.6 |
| cvpa family protein | CALAB_RS14070 | Not Available | Positive | 3561212 - 3561784 | 21559.7 |
| endonuclease muts2 | CALAB_RS14075 | Not Available | Positive | 3561792 - 3564143 | 88554.4 |
| hypothetical protein | CALAB_RS14085 | Not Available | Positive | 3565180 - 3566496 | 50773.2 |
| nyn domain-containing protein | CALAB_RS14090 | Not Available | Positive | 3566573 - 3567139 | 22554.3 |
| cog2958 family protein | CALAB_RS14095 | Not Available | Positive | 3567303 - 3568253 | 37086.2 |
| hypothetical protein | CALAB_RS14100 | Not Available | Positive | 3568330 - 3568524 | 7434.95 |
| vit domain-containing protein | CALAB_RS14105 | Not Available | Negative | 3568535 - 3571003 | 94595.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
