Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2884 family protein | CALAB_RS14010 | Not Available | Negative | 3549085 - 3549627 | 20915.2 |
| sagb/thcox family dehydrogenase | CALAB_RS14015 | Not Available | Positive | 3549780 - 3550397 | 22909.5 |
| aminoacyl-trna deacylase | CALAB_RS14020 | Not Available | Positive | 3550457 - 3550924 | 17443.4 |
| gyd domain-containing protein | CALAB_RS14025 | Not Available | Positive | 3550936 - 3551232 | 11359.9 |
| hypothetical protein | CALAB_RS21130 | Not Available | Positive | 3551333 - 3551518 | 6549.23 |
| mannose-6-phosphate isomerase, class i | CALAB_RS14030 | Not Available | Positive | 3551609 - 3552826 | 46250.1 |
| alpha-mannosidase | CALAB_RS14035 | Not Available | Positive | 3552816 - 3555929 | 119656.0 |
| aldose epimerase family protein | CALAB_RS14040 | Not Available | Positive | 3555947 - 3557020 | 40283.8 |
| glycoside hydrolase family 125 protein | CALAB_RS14045 | Not Available | Positive | 3557078 - 3558460 | 52670.7 |
| response regulator | CALAB_RS14050 | Not Available | Positive | 3558783 - 3559565 | 29839.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
