Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| geranylgeranylglycerol-phosphate geranylgeranyltransferase | CALAB_RS13960 | Not Available | Positive | 3539965 - 3540807 | 31581.5 |
| maf family protein | CALAB_RS13965 | Not Available | Positive | 3540809 - 3541420 | 22912.8 |
| response regulator | CALAB_RS13970 | Not Available | Positive | 3541427 - 3541813 | 14819.3 |
| hemolysin family protein | CALAB_RS13975 | Not Available | Positive | 3541873 - 3543096 | 46918.6 |
| 30s ribosomal protein thx | CALAB_RS13980 | Not Available | Negative | 3543127 - 3543231 | 4063.0 |
| wbqc family protein | CALAB_RS13985 | Not Available | Negative | 3543360 - 3544064 | 27842.8 |
| gnat family n-acetyltransferase | CALAB_RS13990 | Not Available | Negative | 3544061 - 3545203 | 45042.4 |
| flagellin | CALAB_RS13995 | Not Available | Positive | 3545466 - 3546290 | 29375.6 |
| yfcc family protein | CALAB_RS14000 | Not Available | Positive | 3546458 - 3547855 | 50345.2 |
| hypothetical protein | CALAB_RS14005 | Not Available | Positive | 3548601 - 3548810 | 8078.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
