Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(38-40) synthase trua | CALAB_RS13910 | Not Available | Positive | 3530696 - 3531421 | 27623.8 |
| fructose-6-phosphate aldolase | CALAB_RS13915 | Not Available | Positive | 3531464 - 3532111 | 23703.1 |
| fructose-6-phosphate aldolase | CALAB_RS13920 | Not Available | Positive | 3532171 - 3532818 | 23435.8 |
| s1c family serine protease | CALAB_RS13925 | Not Available | Positive | 3533016 - 3534209 | 44056.8 |
| phosphatidylserine decarboxylase family protein | CALAB_RS13930 | Not Available | Positive | 3534291 - 3534938 | 24500.6 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | CALAB_RS13935 | Not Available | Positive | 3534935 - 3535663 | 26912.9 |
| twin-arginine translocase tata/tate family subunit | CALAB_RS13940 | Not Available | Positive | 3535721 - 3535969 | 9165.04 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | CALAB_RS13945 | Not Available | Positive | 3535977 - 3537395 | 50870.8 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | CALAB_RS13950 | Not Available | Positive | 3537427 - 3538866 | 54545.5 |
| hypothetical protein | CALAB_RS13955 | Not Available | Positive | 3538966 - 3539718 | 29324.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
