Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | CALAB_RS13805 | Not Available | Positive | 3493965 - 3494543 | 22064.7 |
| glycogen debranching enzyme n-terminal domain-containing protein | CALAB_RS13810 | Not Available | Positive | 3494890 - 3496878 | 77876.4 |
| isl3 family transposase | CALAB_RS13815 | Not Available | Positive | 3497161 - 3498393 | 48191.4 |
| hypothetical protein | CALAB_RS13820 | Not Available | Negative | 3498599 - 3498937 | 13114.1 |
| peptidase ma family metallohydrolase | CALAB_RS13825 | Not Available | Positive | 3499083 - 3502154 | 119166.0 |
| mlae family abc transporter permease | CALAB_RS13830 | Not Available | Positive | 3502158 - 3502928 | 27785.9 |
| abc transporter atp-binding protein | CALAB_RS13835 | Not Available | Positive | 3502946 - 3503704 | 28260.9 |
| pqq-binding-like beta-propeller repeat protein | CALAB_RS13840 | Not Available | Negative | 3503701 - 3505539 | 69339.7 |
| amp nucleosidase | CALAB_RS13845 | Not Available | Positive | 3505913 - 3506719 | 29822.2 |
| hypothetical protein | CALAB_RS13850 | Not Available | Positive | 3507068 - 3507430 | 14066.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
