Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isl3 family transposase | CALAB_RS13710 | Not Available | Positive | 3470852 - 3472084 | 48279.6 |
| (fe-s)-binding protein | CALAB_RS13715 | Not Available | Positive | 3472137 - 3472934 | 29766.9 |
| spoiie family protein phosphatase | CALAB_RS13720 | Not Available | Positive | 3472921 - 3474114 | 45065.6 |
| nad(p)h-dependent oxidoreductase subunit e | CALAB_RS22005 | Not Available | Positive | 3474150 - 3474383 | 8987.14 |
| monomeric | CALAB_RS13730 | Not Available | Positive | 3474388 - 3475773 | 51418.8 |
| response regulator | CALAB_RS13735 | Not Available | Negative | 3476006 - 3477142 | 42346.3 |
| pas domain s-box protein | CALAB_RS20235 | Not Available | Negative | 3477261 - 3481055 | 146028.0 |
| nadh-quinone oxidoreductase subunit n | CALAB_RS13740 | Not Available | Negative | 3481743 - 3483203 | 54250.1 |
| complex i subunit 4 family protein | CALAB_RS13745 | Not Available | Negative | 3483339 - 3484853 | 56169.0 |
| nadh-quinone oxidoreductase subunit l | CALAB_RS13750 | Not Available | Negative | 3484901 - 3486946 | 74932.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
