Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-associated protein flgk | CALAB_RS13660 | Not Available | Positive | 3455923 - 3457266 | 50253.1 |
| flagellar hook-associated protein 3 | CALAB_RS13665 | Not Available | Positive | 3457285 - 3458163 | 33306.0 |
| glycosyltransferase | CALAB_RS20225 | Not Available | Positive | 3458303 - 3463861 | 212204.0 |
| tpr domain-containing glycosyltransferase | CALAB_RS20230 | Not Available | Positive | 3463880 - 3465262 | 52876.5 |
| type ii toxin-antitoxin system hicb family antitoxin | CALAB_RS13680 | Not Available | Negative | 3465614 - 3466057 | 17147.0 |
| sigma-54-dependent transcriptional regulator | CALAB_RS13685 | Not Available | Negative | 3466128 - 3467348 | 46330.1 |
| hypothetical protein | CALAB_RS13690 | Not Available | Negative | 3467341 - 3467976 | 24361.7 |
| sulfite exporter taue/safe family protein | CALAB_RS13695 | Not Available | Positive | 3468168 - 3468899 | 26288.3 |
| (2fe-2s) ferredoxin domain-containing protein | CALAB_RS13700 | Not Available | Positive | 3469675 - 3469929 | 9399.27 |
| [fe-fe] hydrogenase large subunit c-terminal domain-containing protein | CALAB_RS13705 | Not Available | Positive | 3469923 - 3470822 | 33031.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
