Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar export protein flij | CALAB_RS13510 | Not Available | Positive | 3430833 - 3431297 | 18132.6 |
| hypothetical protein | CALAB_RS13515 | Not Available | Positive | 3431301 - 3431873 | 21556.8 |
| hypothetical protein | CALAB_RS13520 | Not Available | Positive | 3431885 - 3433495 | 57323.4 |
| flagellar hook assembly protein flgd | CALAB_RS13525 | Not Available | Positive | 3433506 - 3434186 | 24900.3 |
| tigr02530 family flagellar biosynthesis protein | CALAB_RS13530 | Not Available | Positive | 3434198 - 3434593 | 14379.4 |
| flagellar hook protein flge | CALAB_RS13535 | Not Available | Positive | 3434689 - 3436311 | 57073.2 |
| motility protein a | CALAB_RS13540 | Not Available | Positive | 3436408 - 3437169 | 27628.3 |
| flagellar motor protein motb | CALAB_RS13545 | Not Available | Positive | 3437176 - 3437868 | 26123.7 |
| flagellar basal body-associated protein flil | CALAB_RS13550 | Not Available | Positive | 3437880 - 3438368 | 18377.8 |
| flagellar motor switch protein flim | CALAB_RS13555 | Not Available | Positive | 3438382 - 3439359 | 36982.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
