Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent transcriptional regulator | CALAB_RS13450 | Not Available | Positive | 3420635 - 3422014 | 52260.4 |
| hdod domain-containing protein | CALAB_RS13455 | Not Available | Positive | 3422011 - 3423357 | 50965.6 |
| flagellar basal body rod protein flgb | CALAB_RS13470 | Not Available | Positive | 3424602 - 3424976 | 14002.8 |
| flagellar basal body rod protein flgc | CALAB_RS13475 | Not Available | Positive | 3424988 - 3425485 | 18395.4 |
| hypothetical protein | CALAB_RS13480 | Not Available | Positive | 3425494 - 3425784 | 10860.2 |
| flagellar hook-basal body complex protein flie | CALAB_RS13485 | Not Available | Positive | 3425792 - 3426115 | 11974.2 |
| flagellar basal-body ms-ring/collar protein flif | CALAB_RS13490 | Not Available | Positive | 3426144 - 3427781 | 60820.7 |
| flagellar motor switch protein flig | CALAB_RS13495 | Not Available | Positive | 3427789 - 3428811 | 38590.8 |
| flih/sctl family protein | CALAB_RS13500 | Not Available | Positive | 3428823 - 3429509 | 26425.9 |
| flagellar protein export atpase flii | CALAB_RS13505 | Not Available | Positive | 3429509 - 3430822 | 47892.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
