Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS13350 | Not Available | Positive | 3399277 - 3399612 | 12440.8 |
| pas domain-containing sensor histidine kinase | CALAB_RS13355 | Not Available | Positive | 3399641 - 3401560 | 72616.7 |
| pas domain s-box protein | CALAB_RS13360 | Not Available | Negative | 3401557 - 3404610 | 116213.0 |
| hypothetical protein | CALAB_RS13365 | Not Available | Positive | 3405160 - 3405639 | 18666.6 |
| fapa family protein | CALAB_RS13370 | Not Available | Positive | 3405632 - 3407155 | 57531.9 |
| chemotaxis protein chew | CALAB_RS13375 | Not Available | Positive | 3407176 - 3409359 | 81323.4 |
| chemotaxis protein chew | CALAB_RS13380 | Not Available | Positive | 3409375 - 3409878 | 19009.2 |
| hypothetical protein | CALAB_RS13385 | Not Available | Positive | 3409930 - 3410460 | 20455.6 |
| methyl-accepting chemotaxis protein | CALAB_RS20215 | Not Available | Positive | 3410485 - 3412743 | 81596.9 |
| cher family methyltransferase | CALAB_RS13395 | Not Available | Positive | 3412759 - 3413592 | 32011.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
