Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanine--d-alanine ligase | CALAB_RS13295 | Not Available | Positive | 3390438 - 3391460 | 37895.4 |
| cysteine--trna ligase | CALAB_RS13300 | Not Available | Positive | 3391473 - 3392927 | 55600.2 |
| type iv toxin-antitoxin system abiei family antitoxin domain-containing protein | CALAB_RS13305 | Not Available | Positive | 3393316 - 3393900 | 22767.0 |
| nucleotidyl transferase abieii/abigii toxin family protein | CALAB_RS13310 | Not Available | Positive | 3393887 - 3394555 | 26055.8 |
| flagellin | CALAB_RS13320 | Not Available | Positive | 3395219 - 3396043 | 29125.2 |
| flagellar protein flis | CALAB_RS13325 | Not Available | Positive | 3396124 - 3396450 | 12491.0 |
| flagellar filament capping protein flid | CALAB_RS13330 | Not Available | Positive | 3396472 - 3397950 | 54571.4 |
| flagellar protein flag | CALAB_RS20210 | Not Available | Positive | 3397969 - 3398346 | 14497.3 |
| hypothetical protein | CALAB_RS13340 | Not Available | Positive | 3398346 - 3398765 | 16305.9 |
| hypothetical protein | CALAB_RS13345 | Not Available | Positive | 3398769 - 3399131 | 13458.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
