Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | CALAB_RS13245 | Not Available | Negative | 3381213 - 3382217 | 39079.4 |
| b12-binding domain-containing radical sam protein | CALAB_RS13250 | Not Available | Positive | 3382314 - 3383795 | 56385.0 |
| yebc/pmpr family dna-binding transcriptional regulator | CALAB_RS13255 | Not Available | Positive | 3384028 - 3384783 | 28290.5 |
| crossover junction endodeoxyribonuclease ruvc | CALAB_RS13260 | Not Available | Positive | 3384790 - 3385269 | 17337.3 |
| holliday junction branch migration protein ruva | CALAB_RS13265 | Not Available | Positive | 3385279 - 3385878 | 21622.3 |
| holliday junction branch migration dna helicase ruvb | CALAB_RS13270 | Not Available | Positive | 3385884 - 3386903 | 38105.3 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | CALAB_RS13275 | Not Available | Positive | 3386927 - 3387958 | 38871.8 |
| hypothetical protein | CALAB_RS13280 | Not Available | Positive | 3387974 - 3388375 | 14530.7 |
| deda family protein | CALAB_RS13285 | Not Available | Positive | 3388377 - 3389015 | 24056.0 |
| glutamate--trna ligase | CALAB_RS13290 | Not Available | Positive | 3389008 - 3390441 | 54903.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
