Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerate kinase | CALAB_RS13195 | Not Available | Positive | 3365694 - 3367016 | 47961.4 |
| spoiie family protein phosphatase | CALAB_RS13200 | Not Available | Positive | 3367471 - 3369678 | 83846.5 |
| utp--glucose-1-phosphate uridylyltransferase | CALAB_RS13205 | Not Available | Positive | 3369671 - 3371077 | 53622.6 |
| hypothetical protein | CALAB_RS13210 | Not Available | Positive | 3371131 - 3371673 | 20985.4 |
| peptide chain release factor n(5)-glutamine methyltransferase | CALAB_RS13215 | Not Available | Positive | 3372051 - 3372923 | 33517.0 |
| ribonuclease r | CALAB_RS13220 | Not Available | Positive | 3372920 - 3375142 | 86017.6 |
| aminopeptidase | CALAB_RS13225 | Not Available | Positive | 3375210 - 3376403 | 45305.4 |
| cyclopropane fatty acyl phospholipid synthase | CALAB_RS13230 | Not Available | Negative | 3376913 - 3378034 | 43330.0 |
| urocanate hydratase | CALAB_RS13235 | Not Available | Positive | 3378356 - 3380383 | 75474.3 |
| response regulator transcription factor | CALAB_RS13240 | Not Available | Negative | 3380530 - 3381216 | 26639.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
