Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pin domain nuclease | CALAB_RS13140 | Not Available | Negative | 3327418 - 3327807 | 14919.4 |
| type ii toxin-antitoxin system vapb family antitoxin | CALAB_RS13145 | Not Available | Negative | 3327804 - 3328013 | 8133.15 |
| non-ribosomal peptide synthetase | CALAB_RS20205 | Not Available | Negative | 3328103 - 3337081 | 340067.0 |
| non-ribosomal peptide synthetase | CALAB_RS13160 | Not Available | Negative | 3337114 - 3341805 | 180245.0 |
| type i polyketide synthase | CALAB_RS13165 | Not Available | Negative | 3341802 - 3346466 | 173201.0 |
| choline/carnitine o-acyltransferase | CALAB_RS13170 | Not Available | Negative | 3346592 - 3348403 | 68028.5 |
| hybrid non-ribosomal peptide synthetase/type i polyketide synthase | CALAB_RS13175 | Not Available | Negative | 3348471 - 3360077 | 434503.0 |
| hypothetical protein | CALAB_RS13180 | Not Available | Negative | 3360175 - 3360891 | 28624.9 |
| pyruvate, phosphate dikinase | CALAB_RS13185 | Not Available | Positive | 3361641 - 3364322 | 99079.0 |
| dmt family transporter | CALAB_RS13190 | Not Available | Negative | 3364761 - 3365627 | 32439.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
