Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialate o-acetylesterase | CALAB_RS13035 | Not Available | Positive | 3271938 - 3273671 | 65437.7 |
| had hydrolase family protein | CALAB_RS13040 | Not Available | Positive | 3273671 - 3274498 | 31731.0 |
| choice-of-anchor b family protein | CALAB_RS13045 | Not Available | Negative | 3274570 - 3277122 | 94426.9 |
| flgd immunoglobulin-like domain containing protein | CALAB_RS13050 | Not Available | Negative | 3277276 - 3279462 | 80991.1 |
| hypothetical protein | CALAB_RS13055 | Not Available | Negative | 3279669 - 3280448 | 29946.7 |
| serine/threonine protein kinase | CALAB_RS20200 | Not Available | Negative | 3280461 - 3282020 | 59374.6 |
| sigma-54 interaction domain-containing protein | CALAB_RS13065 | Not Available | Negative | 3282020 - 3283516 | 57132.9 |
| fibronectin type iii domain-containing protein | CALAB_RS13070 | Not Available | Negative | 3283506 - 3284483 | 37194.4 |
| 4'-phosphopantetheinyl transferase family protein | CALAB_RS13075 | Not Available | Negative | 3284673 - 3285422 | 28680.4 |
| thioesterase ii family protein | CALAB_RS13080 | Not Available | Negative | 3285422 - 3286186 | 28382.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
