Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine o-acetyltransferase epsc | CALAB_RS12985 | Not Available | Negative | 3251660 - 3252505 | 31533.9 |
| circadian clock protein kaic | CALAB_RS12990 | Not Available | Positive | 3253502 - 3255178 | 62818.0 |
| circadian clock kaib family protein | CALAB_RS12995 | Not Available | Positive | 3255201 - 3255515 | 11596.2 |
| hypothetical protein | CALAB_RS13000 | Not Available | Positive | 3255505 - 3255861 | 13307.2 |
| pas domain-containing sensor histidine kinase | CALAB_RS20185 | Not Available | Positive | 3255824 - 3258379 | 96457.5 |
| response regulator | CALAB_RS20190 | Not Available | Negative | 3258536 - 3261340 | 105995.0 |
| pas domain s-box protein | CALAB_RS13015 | Not Available | Negative | 3261355 - 3265101 | 144306.0 |
| ykgj family cysteine cluster protein | CALAB_RS20195 | Not Available | Negative | 3265740 - 3266240 | 19526.4 |
| fad-binding and (fe-s)-binding domain-containing protein | CALAB_RS13025 | Not Available | Positive | 3266353 - 3269181 | 105044.0 |
| s8 family serine peptidase | CALAB_RS13030 | Not Available | Negative | 3269708 - 3271819 | 76577.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
