Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hicb family antitoxin | CALAB_RS12880 | Not Available | Negative | 3222818 - 3223036 | 8280.95 |
| trans-sulfuration enzyme family protein | CALAB_RS12890 | Not Available | Negative | 3224064 - 3225248 | 42642.8 |
| penicillin acylase family protein | CALAB_RS12895 | Not Available | Positive | 3225395 - 3227764 | 91463.6 |
| fad:protein fmn transferase | CALAB_RS12900 | Not Available | Positive | 3229058 - 3229996 | 34482.4 |
| isl3 family transposase | CALAB_RS12905 | Not Available | Positive | 3230200 - 3231432 | 48191.4 |
| is1634 family transposase | CALAB_RS12910 | Not Available | Negative | 3231732 - 3233528 | 70253.2 |
| acyl carrier protein | CALAB_RS12915 | Not Available | Positive | 3234070 - 3234312 | 8980.4 |
| acetate--coa ligase family protein | CALAB_RS12920 | Not Available | Positive | 3234330 - 3236462 | 77507.1 |
| glucosamine-6-phosphate deaminase | CALAB_RS12925 | Not Available | Positive | 3236484 - 3237296 | 30777.9 |
| duf4954 family protein | CALAB_RS12930 | Not Available | Positive | 3237411 - 3239384 | 74031.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
