Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitric-oxide reductase large subunit | CALAB_RS12830 | Not Available | Negative | 3209457 - 3211673 | 84214.1 |
| hemerythrin domain-containing protein | CALAB_RS12835 | Not Available | Negative | 3211724 - 3212200 | 18817.0 |
| m14 family metallopeptidase | CALAB_RS12840 | Not Available | Positive | 3212424 - 3215039 | 99183.4 |
| 7-cyano-7-deazaguanine synthase quec | CALAB_RS12845 | Not Available | Negative | 3215674 - 3216357 | 25329.1 |
| preq(1) synthase | CALAB_RS12850 | Not Available | Negative | 3216603 - 3216965 | 14008.8 |
| radical sam protein | CALAB_RS12855 | Not Available | Negative | 3216985 - 3217638 | 25043.4 |
| 6-carboxytetrahydropterin synthase qued | CALAB_RS12860 | Not Available | Negative | 3217642 - 3218007 | 14175.1 |
| s41 family peptidase | CALAB_RS12865 | Not Available | Positive | 3218343 - 3221606 | 125819.0 |
| hypothetical protein | CALAB_RS12870 | Not Available | Negative | 3221978 - 3222526 | 21218.5 |
| type ii toxin-antitoxin system hica family toxin | CALAB_RS22000 | Not Available | Negative | 3222622 - 3222825 | 7870.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
