Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel-responsive transcriptional regulator nikr | CALAB_RS12785 | Not Available | Positive | 3200583 - 3201002 | 16117.6 |
| energy-coupling factor transporter transmembrane component t family protein | CALAB_RS12790 | Not Available | Positive | 3201013 - 3201771 | 28869.5 |
| energy-coupling factor abc transporter atp-binding protein | CALAB_RS12795 | Not Available | Positive | 3201762 - 3202505 | 27642.5 |
| tonb-dependent receptor | CALAB_RS12800 | Not Available | Positive | 3202522 - 3204384 | 68801.5 |
| ecf transporter s component | CALAB_RS12805 | Not Available | Positive | 3204389 - 3204907 | 19172.1 |
| class i sam-dependent methyltransferase | CALAB_RS12810 | Not Available | Positive | 3204911 - 3205519 | 23131.3 |
| lptf/lptg family permease | CALAB_RS12815 | Not Available | Positive | 3205644 - 3207119 | 56899.0 |
| hypothetical protein | CALAB_RS21370 | Not Available | Positive | 3207161 - 3207337 | 6843.12 |
| lps export abc transporter permease lptg | CALAB_RS12820 | Not Available | Positive | 3207334 - 3208413 | 40814.8 |
| cbs domain-containing protein | CALAB_RS12825 | Not Available | Positive | 3208740 - 3209174 | 16263.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
