Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphofructokinase | CALAB_RS12735 | Not Available | Positive | 3188434 - 3189531 | 39708.9 |
| hd-gyp domain-containing protein | CALAB_RS12740 | Not Available | Positive | 3189899 - 3191020 | 43274.3 |
| homocysteine s-methyltransferase family protein | CALAB_RS12745 | Not Available | Positive | 3191038 - 3191928 | 32234.8 |
| cobalamin-dependent protein | CALAB_RS12750 | Not Available | Positive | 3191999 - 3192664 | 23886.3 |
| phytanoyl-coa dioxygenase family protein | CALAB_RS12755 | Not Available | Positive | 3192678 - 3193532 | 32922.3 |
| uroporphyrinogen decarboxylase family protein | CALAB_RS12760 | Not Available | Positive | 3193540 - 3194562 | 38442.2 |
| rok family transcriptional regulator | CALAB_RS12765 | Not Available | Positive | 3194572 - 3195741 | 43603.3 |
| clp1/glmu family protein | CALAB_RS12770 | Not Available | Negative | 3195837 - 3196721 | 33135.7 |
| nucleotidyltransferase family protein | CALAB_RS12775 | Not Available | Negative | 3196992 - 3197900 | 34485.4 |
| sulfotransferase family protein | CALAB_RS12780 | Not Available | Negative | 3199004 - 3200086 | 43112.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
