Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| roadblock/lc7 domain-containing protein | CALAB_RS12390 | Not Available | Positive | 3111043 - 3111555 | 18720.4 |
| gtp-binding protein | CALAB_RS12395 | Not Available | Positive | 3111616 - 3112200 | 22271.9 |
| mfs transporter | CALAB_RS12400 | Not Available | Positive | 3112272 - 3113606 | 49236.3 |
| peptidase ma family metallohydrolase | CALAB_RS12405 | Not Available | Positive | 3113712 - 3114569 | 33380.8 |
| pyruvoyl-dependent arginine decarboxylase | CALAB_RS12410 | Not Available | Positive | 3114572 - 3115117 | 19730.6 |
| agmatinase | CALAB_RS12415 | Not Available | Positive | 3115140 - 3115991 | 32393.9 |
| alpha-amylase/4-alpha-glucanotransferase domain-containing protein | CALAB_RS12420 | Not Available | Positive | 3116013 - 3118139 | 82769.5 |
| s41 family peptidase | CALAB_RS12425 | Not Available | Positive | 3118303 - 3119901 | 61531.1 |
| mota/tolq/exbb proton channel family protein | CALAB_RS12430 | Not Available | Positive | 3120047 - 3120634 | 21045.0 |
| exbd/tolr family protein | CALAB_RS12435 | Not Available | Positive | 3120654 - 3121061 | 15098.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
