Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6 | CALAB_RS20165 | Not Available | Positive | 3102784 - 3103296 | 19142.3 |
| 30s ribosomal protein s18 | CALAB_RS12345 | Not Available | Positive | 3103309 - 3103536 | 8900.17 |
| 50s ribosomal protein l9 | CALAB_RS12350 | Not Available | Positive | 3103559 - 3104002 | 16458.1 |
| primosomal protein n' | CALAB_RS12355 | Not Available | Positive | 3104420 - 3106873 | 93926.8 |
| two-component system sensor histidine kinase ntrb | CALAB_RS20170 | Not Available | Positive | 3106992 - 3108269 | 48532.3 |
| response regulator | CALAB_RS12365 | Not Available | Positive | 3108251 - 3108616 | 14065.2 |
| duf4388 domain-containing protein | CALAB_RS12370 | Not Available | Positive | 3108618 - 3109268 | 24855.2 |
| hypothetical protein | CALAB_RS12375 | Not Available | Positive | 3109315 - 3109752 | 16793.0 |
| hypothetical protein | CALAB_RS12380 | Not Available | Positive | 3109791 - 3110249 | 17289.0 |
| hamp domain-containing protein | CALAB_RS12385 | Not Available | Positive | 3110265 - 3111017 | 28221.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
