Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | CALAB_RS20160 | Not Available | Positive | 3078434 - 3079414 | 37578.8 |
| tetratricopeptide repeat protein | CALAB_RS12245 | Not Available | Positive | 3079578 - 3080489 | 37125.1 |
| had family hydrolase | CALAB_RS12250 | Not Available | Positive | 3080538 - 3081206 | 25694.1 |
| cold-shock protein | CALAB_RS12255 | Not Available | Negative | 3081298 - 3081504 | 7710.14 |
| hypothetical protein | CALAB_RS12260 | Not Available | Negative | 3081525 - 3082262 | 29725.8 |
| sulfite exporter taue/safe family protein | CALAB_RS12265 | Not Available | Negative | 3082299 - 3083033 | 27232.8 |
| aminopeptidase | CALAB_RS12270 | Not Available | Negative | 3083065 - 3084027 | 34192.8 |
| hypothetical protein | CALAB_RS12275 | Not Available | Negative | 3084207 - 3086027 | 71292.5 |
| diphosphate--fructose-6-phosphate 1-phosphotransferase | CALAB_RS12280 | Not Available | Positive | 3086409 - 3087746 | 49264.9 |
| hypothetical protein | CALAB_RS12285 | Not Available | Negative | 3087911 - 3089023 | 41424.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
