Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | CALAB_RS12190 | Not Available | Positive | 3068749 - 3069651 | 34941.3 |
| patatin-like phospholipase family protein | CALAB_RS12195 | Not Available | Positive | 3069742 - 3070656 | 33917.7 |
| phosphopentomutase | CALAB_RS12200 | Not Available | Positive | 3070668 - 3071840 | 43436.1 |
| hypothetical protein | CALAB_RS12205 | Not Available | Positive | 3071875 - 3072180 | 11719.4 |
| rna polymerase sigma factor rpod/siga | CALAB_RS12210 | Not Available | Positive | 3072249 - 3073094 | 32361.9 |
| m23 family metallopeptidase | CALAB_RS20155 | Not Available | Positive | 3073216 - 3074163 | 36020.8 |
| capa family protein | CALAB_RS12220 | Not Available | Positive | 3074194 - 3075192 | 38105.1 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | CALAB_RS12225 | Not Available | Positive | 3075426 - 3075719 | 11228.4 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | CALAB_RS12230 | Not Available | Positive | 3075716 - 3076471 | 28630.5 |
| ctp synthase | CALAB_RS12235 | Not Available | Positive | 3076474 - 3078087 | 60384.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
