Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsa | CALAB_RS12135 | Not Available | Positive | 3052539 - 3053765 | 43771.1 |
| cell division protein ftsz | CALAB_RS12140 | Not Available | Positive | 3053798 - 3055027 | 44045.8 |
| merr family transcriptional regulator | CALAB_RS12145 | Not Available | Positive | 3055194 - 3055409 | 8488.48 |
| tol-pal system protein ybgf | CALAB_RS20145 | Not Available | Negative | 3056247 - 3057080 | 31881.4 |
| sigma factor-like helix-turn-helix dna-binding protein | CALAB_RS20150 | Not Available | Positive | 3057432 - 3058391 | 37630.2 |
| Trna-gly | Not Available | Not Available | Positive | 3058792 - 3058864 | Not Available |
| tetratricopeptide repeat protein | CALAB_RS12170 | Not Available | Positive | 3058919 - 3059998 | 41560.7 |
| glycosyltransferase | CALAB_RS12175 | Not Available | Negative | 3059993 - 3061123 | 42989.7 |
| glycosyltransferase | CALAB_RS12180 | Not Available | Negative | 3061129 - 3062286 | 43948.7 |
| flgd immunoglobulin-like domain containing protein | CALAB_RS12185 | Not Available | Positive | 3062546 - 3068401 | 220573.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
