Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS12085 | Not Available | Positive | 3040159 - 3040536 | 14877.7 |
| penicillin-binding protein | CALAB_RS12090 | Not Available | Positive | 3040555 - 3042603 | 77171.6 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | CALAB_RS12095 | Not Available | Positive | 3042758 - 3044224 | 53806.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | CALAB_RS12100 | Not Available | Positive | 3044217 - 3045569 | 50084.7 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | CALAB_RS12105 | Not Available | Positive | 3045584 - 3046687 | 41001.5 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | CALAB_RS12110 | Not Available | Positive | 3046699 - 3048045 | 50227.2 |
| putative lipid ii flippase ftsw | CALAB_RS12115 | Not Available | Positive | 3048047 - 3049207 | 43458.4 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | CALAB_RS12120 | Not Available | Positive | 3049207 - 3050340 | 41647.6 |
| udp-n-acetylmuramate--l-alanine ligase | CALAB_RS12125 | Not Available | Positive | 3050337 - 3051710 | 50971.4 |
| cell division protein ftsq/divib | CALAB_RS12130 | Not Available | Positive | 3051730 - 3052512 | 29841.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
