Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ccmd family protein | CALAB_RS20730 | Not Available | Positive | 3025544 - 3025687 | 5603.84 |
| cytochrome c maturation protein ccme | CALAB_RS12040 | Not Available | Positive | 3025716 - 3026087 | 13643.2 |
| heme lyase ccmf/nrfe family subunit | CALAB_RS12045 | Not Available | Positive | 3026084 - 3028303 | 83630.0 |
| nadp-specific glutamate dehydrogenase | CALAB_RS12050 | Not Available | Negative | 3028445 - 3029806 | 49952.8 |
| response regulator transcription factor | CALAB_RS12055 | Not Available | Negative | 3030149 - 3030778 | 23465.8 |
| pas domain s-box protein | CALAB_RS20140 | Not Available | Negative | 3030907 - 3033240 | 89569.8 |
| glu/leu/phe/val family dehydrogenase | CALAB_RS12065 | Not Available | Positive | 3033678 - 3034964 | 47750.1 |
| pep/pyruvate-binding domain-containing protein | CALAB_RS12070 | Not Available | Positive | 3035083 - 3038286 | 123075.0 |
| division/cell wall cluster transcriptional repressor mraz | CALAB_RS12075 | Not Available | Positive | 3038758 - 3039237 | 18377.2 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | CALAB_RS12080 | Not Available | Positive | 3039230 - 3040162 | 35225.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
