Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sir2 family nad-dependent protein deacylase | CALAB_RS00955 | Not Available | Positive | 257431 - 258204 | 28716.0 |
| ggdef domain-containing protein | CALAB_RS00960 | Not Available | Negative | 258232 - 259068 | 31868.2 |
| is1634 family transposase | CALAB_RS00970 | Not Available | Positive | 259919 - 261715 | 70253.2 |
| hypothetical protein | CALAB_RS00975 | Not Available | Positive | 261785 - 262399 | 23159.7 |
| peroxiredoxin family protein | CALAB_RS00980 | Not Available | Negative | 262629 - 263306 | 26295.6 |
| hypothetical protein | CALAB_RS00985 | Not Available | Negative | 263312 - 263938 | 23673.6 |
| trap transporter large permease | CALAB_RS00990 | Not Available | Negative | 263959 - 265239 | 46445.6 |
| trap transporter small permease | CALAB_RS00995 | Not Available | Negative | 265236 - 265727 | 18923.9 |
| duf3592 domain-containing protein | CALAB_RS01000 | Not Available | Positive | 266312 - 266782 | 17825.1 |
| helicase c-terminal domain-containing protein | CALAB_RS01005 | Not Available | Positive | 267038 - 270025 | 115389.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
