Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| comf family protein | CALAB_RS11995 | Not Available | Negative | 3012724 - 3013470 | 28265.0 |
| hypothetical protein | CALAB_RS12000 | Not Available | Negative | 3013603 - 3014907 | 49169.8 |
| sigma-70 family rna polymerase sigma factor | CALAB_RS12005 | Not Available | Positive | 3015369 - 3016127 | 29656.1 |
| response regulator | CALAB_RS12010 | Not Available | Positive | 3016194 - 3017324 | 43155.8 |
| hypothetical protein | CALAB_RS21360 | Not Available | Positive | 3018003 - 3018176 | 6967.64 |
| tonb-dependent receptor | CALAB_RS12015 | Not Available | Positive | 3018466 - 3021201 | 103296.0 |
| is1182 family transposase | CALAB_RS12020 | Not Available | Negative | 3021718 - 3023304 | 61382.2 |
| abc transporter atp-binding protein | CALAB_RS12025 | Not Available | Positive | 3023524 - 3024138 | 23366.6 |
| heme exporter protein ccmb | CALAB_RS12030 | Not Available | Positive | 3024138 - 3024797 | 24354.7 |
| cytochrome c biogenesis protein | CALAB_RS12035 | Not Available | Positive | 3024862 - 3025542 | 26815.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
