Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotransferase | CALAB_RS11845 | Not Available | Positive | 2969492 - 2970553 | 41715.9 |
| alginate lyase family protein | CALAB_RS11850 | Not Available | Positive | 2970550 - 2972820 | 87609.4 |
| glycosyltransferase | CALAB_RS11855 | Not Available | Positive | 2972885 - 2973952 | 40538.9 |
| glycosyltransferase family 4 protein | CALAB_RS11860 | Not Available | Positive | 2973949 - 2975121 | 45081.1 |
| hypothetical protein | CALAB_RS11865 | Not Available | Positive | 2975200 - 2977716 | 94768.8 |
| hypothetical protein | CALAB_RS20130 | Not Available | Positive | 2978249 - 2979211 | 37276.7 |
| nad-dependent epimerase/dehydratase family protein | CALAB_RS11875 | Not Available | Positive | 2979215 - 2980165 | 35487.3 |
| class i sam-dependent methyltransferase | CALAB_RS11880 | Not Available | Positive | 2980155 - 2981030 | 34525.4 |
| glycosyltransferase | CALAB_RS11885 | Not Available | Positive | 2981032 - 2981928 | 34104.9 |
| glycosyltransferase family 2 protein | CALAB_RS20940 | Not Available | Positive | 2981921 - 2983639 | 66785.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
