Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | CALAB_RS11795 | Not Available | Positive | 2958755 - 2959903 | 43878.1 |
| hypothetical protein | CALAB_RS11800 | Not Available | Positive | 2959907 - 2960968 | 40830.6 |
| acyl carrier protein | CALAB_RS11805 | Not Available | Positive | 2960991 - 2961236 | 9529.18 |
| gnat family n-acetyltransferase | CALAB_RS11810 | Not Available | Positive | 2961258 - 2961929 | 26068.4 |
| lipopolysaccharide biosynthesis protein | CALAB_RS11815 | Not Available | Positive | 2961936 - 2963420 | 56232.4 |
| lactate racemase domain-containing protein | CALAB_RS11820 | Not Available | Positive | 2963421 - 2964638 | 45915.8 |
| o-antigen ligase family protein | CALAB_RS11825 | Not Available | Positive | 2964642 - 2965916 | 49200.1 |
| glycosyltransferase family 4 protein | CALAB_RS11830 | Not Available | Positive | 2965937 - 2967310 | 53245.8 |
| glycosyltransferase | CALAB_RS11835 | Not Available | Positive | 2967300 - 2968454 | 43529.7 |
| polysaccharide deacetylase family protein | CALAB_RS11840 | Not Available | Positive | 2968438 - 2969469 | 39418.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
