Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor ts | CALAB_RS11745 | Not Available | Positive | 2948225 - 2948821 | 22209.7 |
| ump kinase | CALAB_RS11750 | Not Available | Positive | 2948828 - 2949553 | 25793.5 |
| ribosome recycling factor | CALAB_RS11755 | Not Available | Positive | 2949560 - 2950120 | 21412.0 |
| sugar transferase | CALAB_RS20120 | Not Available | Positive | 2950352 - 2951314 | 36842.4 |
| stas domain-containing protein | CALAB_RS20125 | Not Available | Positive | 2951492 - 2952295 | 30501.0 |
| polysaccharide biosynthesis/export family protein | CALAB_RS11770 | Not Available | Positive | 2952312 - 2953004 | 26638.2 |
| polysaccharide biosynthesis tyrosine autokinase | CALAB_RS11775 | Not Available | Positive | 2953029 - 2955365 | 88768.7 |
| femab family xrta/pep-cterm system-associated protein | CALAB_RS11780 | Not Available | Positive | 2955459 - 2956493 | 39930.4 |
| gnat family n-acetyltransferase | CALAB_RS11785 | Not Available | Positive | 2956508 - 2957626 | 43929.0 |
| degt/dnrj/eryc1/strs family aminotransferase | CALAB_RS11790 | Not Available | Positive | 2957623 - 2958753 | 43766.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
