Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate kinase | CALAB_RS11645 | Not Available | Positive | 2928556 - 2929926 | 50872.1 |
| Trna-leu | Not Available | Not Available | Positive | 2930265 - 2930348 | Not Available |
| acyl-[acyl-carrier-protein] thioesterase | CALAB_RS11655 | Not Available | Negative | 2930392 - 2931153 | 30280.0 |
| duf429 domain-containing protein | CALAB_RS11660 | Not Available | Negative | 2931481 - 2932227 | 27705.8 |
| s66 peptidase family protein | CALAB_RS11665 | Not Available | Negative | 2932776 - 2933834 | 39058.3 |
| pas domain s-box protein | CALAB_RS11670 | Not Available | Positive | 2933981 - 2935210 | 47357.8 |
| atp-binding protein | CALAB_RS11675 | Not Available | Positive | 2935448 - 2936983 | 58608.4 |
| feccd family abc transporter permease | CALAB_RS11680 | Not Available | Positive | 2937001 - 2937981 | 35561.0 |
| sh3 domain-containing protein | CALAB_RS11685 | Not Available | Negative | 2937982 - 2938779 | 30023.3 |
| tetratricopeptide repeat protein | CALAB_RS11690 | Not Available | Negative | 2939123 - 2939449 | 12307.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
