Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | CALAB_RS21540 | Not Available | Positive | 2909500 - 2910060 | 21854.8 |
| monovalent cation:proton antiporter family protein | CALAB_RS11590 | Not Available | Positive | 2910893 - 2912890 | 73116.3 |
| na+/h+ antiporter nhaa | CALAB_RS11600 | Not Available | Positive | 2913342 - 2914532 | 42906.1 |
| t9ss type a sorting domain-containing protein | CALAB_RS11605 | Not Available | Negative | 2914589 - 2915788 | 44605.7 |
| t9ss type a sorting domain-containing protein | CALAB_RS11610 | Not Available | Negative | 2916038 - 2919406 | 123745.0 |
| carboxypeptidase-like regulatory domain-containing protein | CALAB_RS11615 | Not Available | Negative | 2920472 - 2920819 | 12686.8 |
| aminopeptidase p family protein | CALAB_RS11620 | Not Available | Negative | 2921120 - 2922907 | 67997.8 |
| hypothetical protein | CALAB_RS11625 | Not Available | Negative | 2923125 - 2924972 | 71280.5 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | CALAB_RS11635 | Not Available | Positive | 2926105 - 2927406 | 47448.1 |
| homoserine o-acetyltransferase metx | CALAB_RS11640 | Not Available | Positive | 2927422 - 2928540 | 41078.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
