Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase family protein | CALAB_RS11525 | Not Available | Positive | 2887460 - 2888404 | 36132.9 |
| t9ss type a sorting domain-containing protein | CALAB_RS20105 | Not Available | Positive | 2889218 - 2891032 | 68414.9 |
| outer membrane protein assembly factor | CALAB_RS11535 | Not Available | Negative | 2891034 - 2892935 | 72913.1 |
| is110 family transposase | CALAB_RS11545 | Not Available | Negative | 2894137 - 2895096 | 37343.8 |
| translocation/assembly module tamb domain-containing protein | CALAB_RS11550 | Not Available | Negative | 2895525 - 2899550 | 152703.0 |
| hypothetical protein | CALAB_RS11555 | Not Available | Negative | 2900034 - 2901299 | 47431.5 |
| carbonic anhydrase | CALAB_RS11565 | Not Available | Positive | 2902146 - 2902976 | 31555.2 |
| tolc family protein | CALAB_RS11570 | Not Available | Positive | 2903855 - 2905207 | 50638.8 |
| efflux rnd transporter periplasmic adaptor subunit | CALAB_RS11575 | Not Available | Positive | 2905219 - 2906271 | 38801.2 |
| efflux rnd transporter permease subunit | CALAB_RS11580 | Not Available | Positive | 2906268 - 2909366 | 112870.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
