Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialidase family protein | CALAB_RS00900 | Not Available | Negative | 242561 - 244036 | 55572.0 |
| hypothetical protein | CALAB_RS00905 | Not Available | Negative | 244036 - 244527 | 17926.0 |
| ppx/gppa phosphatase family protein | CALAB_RS00910 | Not Available | Negative | 244725 - 245657 | 34713.0 |
| 50s ribosomal protein l11 methyltransferase | CALAB_RS00915 | Not Available | Negative | 245647 - 246513 | 32615.9 |
| m28 family peptidase | CALAB_RS00920 | Not Available | Negative | 246503 - 247390 | 34377.9 |
| cell surface protein spra | CALAB_RS00925 | Not Available | Negative | 247400 - 253726 | 241389.0 |
| response regulator | CALAB_RS00930 | Not Available | Positive | 254180 - 254551 | 14181.6 |
| damage-control phosphatase armt1 family protein | CALAB_RS00935 | Not Available | Negative | 254541 - 255419 | 33481.4 |
| inorganic pyrophosphatase | CALAB_RS00945 | Not Available | Negative | 255812 - 256492 | 25852.0 |
| hypothetical protein | CALAB_RS00950 | Not Available | Positive | 256594 - 257415 | 31086.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
