Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | CALAB_RS11475 | Not Available | Positive | 2873926 - 2875020 | 42350.0 |
| acyltransferase | CALAB_RS21875 | Not Available | Positive | 2875047 - 2875577 | 19428.0 |
| alginate lyase family protein | CALAB_RS11485 | Not Available | Positive | 2875807 - 2877588 | 69041.5 |
| glycosyltransferase family 4 protein | CALAB_RS11490 | Not Available | Positive | 2877585 - 2878808 | 46361.5 |
| sugar transferase | CALAB_RS11495 | Not Available | Positive | 2878808 - 2879413 | 23324.0 |
| neud/pglb/viob family sugar acetyltransferase | CALAB_RS11500 | Not Available | Positive | 2879435 - 2880091 | 23407.3 |
| zinc-ribbon domain-containing protein | CALAB_RS21995 | Not Available | Positive | 2880099 - 2881224 | 39945.5 |
| polysaccharide biosynthesis protein | CALAB_RS11510 | Not Available | Positive | 2881408 - 2883306 | 71115.8 |
| phosphodiester glycosidase family protein | CALAB_RS11515 | Not Available | Positive | 2884515 - 2886974 | 90842.0 |
| Trna-val | Not Available | Not Available | Positive | 2887035 - 2887108 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
