Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | CALAB_RS11430 | Not Available | Positive | 2864387 - 2864935 | 20716.6 |
| hypothetical protein | CALAB_RS21745 | Not Available | Positive | 2864957 - 2866015 | 41851.8 |
| hypothetical protein | CALAB_RS11440 | Not Available | Positive | 2866027 - 2866347 | 11940.6 |
| hypothetical protein | CALAB_RS11445 | Not Available | Positive | 2866359 - 2866643 | 10483.9 |
| is1096 element passenger tnpr family protein | CALAB_RS11450 | Not Available | Positive | 2867243 - 2867710 | 18520.2 |
| atp-binding protein | CALAB_RS11455 | Not Available | Positive | 2867897 - 2869171 | 50678.9 |
| duf6922 domain-containing protein | CALAB_RS21990 | Not Available | Positive | 2869214 - 2869330 | 4826.02 |
| wzz/fepe/etk n-terminal domain-containing protein | CALAB_RS11460 | Not Available | Positive | 2870323 - 2871492 | 45329.1 |
| oligosaccharide flippase family protein | CALAB_RS11465 | Not Available | Positive | 2871498 - 2872760 | 47509.9 |
| o-antigen ligase family protein | CALAB_RS11470 | Not Available | Positive | 2872757 - 2873929 | 44710.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
