Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 130 protein | CALAB_RS11370 | Not Available | Positive | 2850828 - 2851748 | 35160.1 |
| hypothetical protein | CALAB_RS21120 | Not Available | Positive | 2851739 - 2853028 | 48927.9 |
| glycoside hydrolase family 2 protein | CALAB_RS11380 | Not Available | Positive | 2853160 - 2855601 | 95792.4 |
| trna adenosine(34) deaminase tada | CALAB_RS11385 | Not Available | Negative | 2855607 - 2856074 | 17205.8 |
| Trna-glu | Not Available | Not Available | Positive | 2857087 - 2857159 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2857196 - 2857269 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 2857282 - 2857355 | Not Available |
| hypothetical protein | CALAB_RS11410 | Not Available | Negative | 2857417 - 2858064 | 25279.6 |
| hypothetical protein | CALAB_RS11420 | Not Available | Positive | 2858655 - 2861459 | 109539.0 |
| slbb domain-containing protein | CALAB_RS11425 | Not Available | Positive | 2861886 - 2864156 | 85142.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
