Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | CALAB_RS11320 | Not Available | Positive | 2832075 - 2833097 | 38274.6 |
| t9ss type a sorting domain-containing protein | CALAB_RS11325 | Not Available | Positive | 2833189 - 2835723 | 94914.5 |
| tonb-dependent receptor | CALAB_RS11330 | Not Available | Positive | 2835988 - 2838678 | 102195.0 |
| hypothetical protein | CALAB_RS11335 | Not Available | Positive | 2838845 - 2842069 | 121501.0 |
| porv/porq family protein | CALAB_RS11340 | Not Available | Positive | 2842155 - 2843177 | 37787.5 |
| lamg-like jellyroll fold domain-containing protein | CALAB_RS11345 | Not Available | Positive | 2843447 - 2846479 | 113718.0 |
| abc transporter substrate-binding protein | CALAB_RS11350 | Not Available | Positive | 2846546 - 2847862 | 50583.0 |
| carbohydrate abc transporter permease | CALAB_RS11355 | Not Available | Positive | 2847859 - 2848737 | 33423.2 |
| carbohydrate abc transporter permease | CALAB_RS11360 | Not Available | Positive | 2848740 - 2849549 | 30432.5 |
| glycoside hydrolase family 130 protein | CALAB_RS11365 | Not Available | Positive | 2849559 - 2850809 | 47523.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
