Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cher family methyltransferase | CALAB_RS11270 | Not Available | Negative | 2817870 - 2819279 | 54541.1 |
| chemotaxis protein chew | CALAB_RS11275 | Not Available | Negative | 2819245 - 2819730 | 18343.4 |
| nicotinate phosphoribosyltransferase | CALAB_RS11280 | Not Available | Positive | 2819900 - 2821309 | 53745.0 |
| bifunctional nicotinamidase/pyrazinamidase | CALAB_RS11285 | Not Available | Positive | 2821311 - 2821928 | 22674.0 |
| macro domain-containing protein | CALAB_RS11290 | Not Available | Positive | 2822488 - 2823036 | 19389.7 |
| duf6901 family protein | CALAB_RS11295 | Not Available | Negative | 2823120 - 2823812 | 26511.1 |
| methionine synthase | CALAB_RS11300 | Not Available | Negative | 2823878 - 2827567 | 137403.0 |
| acetyl-coa carboxylase biotin carboxylase subunit | CALAB_RS11305 | Not Available | Positive | 2827706 - 2829205 | 55299.7 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | CALAB_RS20095 | Not Available | Positive | 2829208 - 2829717 | 18921.1 |
| duf4382 domain-containing protein | CALAB_RS11315 | Not Available | Positive | 2830454 - 2831299 | 30929.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
