Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CALAB_RS11170 | Not Available | Positive | 2795001 - 2795729 | 29105.2 |
| xrta system polysaccharide deacetylase | CALAB_RS11175 | Not Available | Positive | 2795767 - 2796645 | 34120.4 |
| sigma-54-dependent transcriptional regulator | CALAB_RS11180 | Not Available | Positive | 2796691 - 2797167 | 17929.3 |
| secondary thiamine-phosphate synthase enzyme yjbq | CALAB_RS11185 | Not Available | Positive | 2797249 - 2797680 | 16363.7 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | CALAB_RS11190 | Not Available | Negative | 2797684 - 2798664 | 37893.7 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | CALAB_RS11195 | Not Available | Negative | 2798661 - 2799383 | 27083.7 |
| thioredoxin family protein | CALAB_RS11200 | Not Available | Negative | 2799597 - 2799902 | 12040.6 |
| tigr03545 family protein | CALAB_RS11205 | Not Available | Negative | 2799899 - 2801743 | 70679.6 |
| tigr03546 family protein | CALAB_RS11210 | Not Available | Negative | 2801740 - 2802267 | 19739.1 |
| hypothetical protein | CALAB_RS11215 | Not Available | Positive | 2802339 - 2802707 | 13461.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
