Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease subunit s | CALAB_RS00855 | Not Available | Positive | 229414 - 230787 | 52540.0 |
| four helix bundle suffix domain-containing protein | CALAB_RS00860 | Not Available | Positive | 230780 - 231442 | 25441.4 |
| type i restriction endonuclease subunit r | CALAB_RS00865 | Not Available | Positive | 231439 - 234447 | 114306.0 |
| zinc-ribbon domain-containing protein | CALAB_RS21910 | Not Available | Positive | 234446 - 234678 | 8480.98 |
| is1182 family transposase | CALAB_RS00870 | Not Available | Negative | 234853 - 236613 | 68861.9 |
| aminotransferase class iv | CALAB_RS00875 | Not Available | Negative | 237493 - 238338 | 31785.3 |
| p1 family peptidase | CALAB_RS00880 | Not Available | Negative | 238335 - 239480 | 40382.2 |
| ornithine carbamoyltransferase | CALAB_RS00885 | Not Available | Positive | 239693 - 240610 | 34322.3 |
| porv/porq family protein | CALAB_RS00890 | Not Available | Negative | 240692 - 241600 | 33618.6 |
| porv/porq family protein | CALAB_RS00895 | Not Available | Negative | 241610 - 242545 | 34732.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
