Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s5 | CALAB_RS10965 | Not Available | Positive | 2748889 - 2749395 | 17689.9 |
| 50s ribosomal protein l30 | CALAB_RS10970 | Not Available | Positive | 2749419 - 2749616 | 7507.55 |
| 50s ribosomal protein l15 | CALAB_RS10975 | Not Available | Positive | 2749634 - 2750074 | 15941.5 |
| preprotein translocase subunit secy | CALAB_RS10980 | Not Available | Positive | 2750071 - 2751399 | 49124.7 |
| type i methionyl aminopeptidase | CALAB_RS10985 | Not Available | Positive | 2751406 - 2752161 | 27959.9 |
| translation initiation factor if-1 | CALAB_RS10990 | Not Available | Positive | 2752166 - 2752387 | 8364.35 |
| 50s ribosomal protein l36 | CALAB_RS20715 | Not Available | Positive | 2752400 - 2752516 | 4335.6 |
| 30s ribosomal protein s13 | CALAB_RS10995 | Not Available | Positive | 2752537 - 2752908 | 14027.3 |
| 30s ribosomal protein s11 | CALAB_RS11000 | Not Available | Positive | 2752931 - 2753323 | 13926.0 |
| 30s ribosomal protein s4 | CALAB_RS11005 | Not Available | Positive | 2753342 - 2753956 | 23987.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
