Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 2720331 - 2720445 | Not Available |
| transposase | CALAB_RS10775 | Not Available | Positive | 2720967 - 2721269 | 11846.3 |
| is3 family transposase | CALAB_RS10780 | Not Available | Positive | 2721332 - 2722231 | 35526.8 |
| 30s ribosomal protein s20 | CALAB_RS10790 | Not Available | Negative | 2722958 - 2723215 | 10164.4 |
| Trna-thr | Not Available | Not Available | Positive | 2723823 - 2723895 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2723956 - 2724029 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 2724055 - 2724127 | Not Available |
| elongation factor tu | CALAB_RS10810 | Not Available | Positive | 2724178 - 2725368 | 43761.6 |
| 50s ribosomal protein l33 | CALAB_RS20705 | Not Available | Positive | 2725384 - 2725533 | 5980.28 |
| Trna-trp | Not Available | Not Available | Positive | 2725546 - 2725619 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
